  |
Statistical Genetics Software - http://www.biomath.medsch.ucla.edu/faculty/klange/software.html
Collection of primarily Fortan 77 programs for genetic analysis. Requires registration to download. Site not updated since 1999. |
| |
Animal Breeding & Genetics, Wageningen - http://www.zod.wau.nl/abg/hs/links/software.html
Provides programmes in the area of animal breeding including SIP (Selection Index Program), MAGGIC (Gibbs Sampling) and GENEFLOW. Free software for WIN. |
| |
Progeny Software - http://www.progenygenetics.com
Supply pedigree drawing and genetic data management software for genetic research with a built-in customizable relational database. |
| |
Quantitative Genetics Resources - http://nitro.biosci.arizona.edu/zbook/book.html
List of resources with links to programs and notes on a range of subjects including animal and plant breeding, and evolutionary and human genetics. |
| |
R/qtl: A QTL Mapping Environment - http://www.rqtl.org
Program for mapping quantitative trait loci in experimental crosses. Includes sample graphics and tutorial in pdf format. |
| |
PowerMarker - http://statgen.ncsu.edu/powermarker/
Set of statistical methods for discrete genetic data analysis, designed especially for microsatellite data analysis. Includes downloadable versions for Windows. |
| |
The Rosetta Syllego System - http://www.rosettabio.com/products/syllego/default.htm
The system is a resource for managing genetic variation information and integrating relevant study data from various sources so that scientists and researchers can better plan and execute genetic studies. |
| |
Agriculture Business Research Institute - http://abri.une.edu.au
ABRI provides recording systems for all species of commercial livestock. Software offered include Dairy Express, Saltbush and Breedplan. |
| |
http://www.hgu.mrc.ac.uk/Softdata/Lams/ - http://www.hgu.mrc.ac.uk/Softdata/Lams/
Freeware record keeping system designed for a breeding colony of transgenic mice. Includes program description, system requirements, and installation instructions. |
| |
http://cc.oulu.fi/~jaspi/popgen/popgen.htm - http://cc.oulu.fi/~jaspi/popgen/popgen.htm
Software that models population genetics with emphasis on genetic drift, selection, and migration. Windows 95. |
| |
GeneFlow Inc - http://www.geneflowinc.com/
This Virginia, USA company provides software (GeneFlow, SynerGene, QTLlocate) and services oriented towards plant breeding. Website does not give prices or operating systems supported. |
| |
Finnish Forest Genetics and Tree Breeding - http://www.metla.fi/info/vlib/forestgen/software.htm
Links to population and quantitative genetic software of interest in tree improvement, but also useful in other species. |
| |
Locus Technology, Inc - http://www.locustechnology.com/
Colony management, supports creation and tracking of research animals and for transgenic and congenic lines, knockouts and outbred strains. |
| |
ASReml Cookbook - http://uncronopio.org/ASReml
Statistical software designed for fitting mixed models for large datasets. Contains commented code for univariate and multivariate analysis including longitudinal and spatial analysis. |
| |
Big Bench Software - http://www.bigbenchsoftware.com/
Commercial software for the management of transgenic mouse colonies. Windows and Mac OS X. Demo version available. |
| |
http://nitro.biosci.arizona.edu/zbook/general/gened.html - http://nitro.biosci.arizona.edu/zbook/general/gened.html
Graphically represents the effect of genetic drift on gene frequency of one or more populations for a single locus, two allele model in a closed population using stochastic simulation methods. The DOS program is free. |
| |
http://agbu.une.edu.au/~kmeyer/dfreml.html - http://agbu.une.edu.au/~kmeyer/dfreml.html
Meyer's variance component estimation software for animal breeding is free for research purposes, available for UNIX, DOS and FORTRAN source code. |
| |
Laboratory of Plant Breeding, Wageningen - http://www.pbr.wur.nl/UK/Resources/
Offers free downloadable genetics and plant breeding related software. |
| |
http://www-personal.une.edu.au/~bkinghor/genup.htm - http://www-personal.une.edu.au/~bkinghor/genup.htm
Free software to assist learning quantitative genetic concepts (animal breeding) for WIN. |
| |
Pedigree Viewer - http://www-personal.une.edu.au/~bkinghor/pedigree.htm
Unique display and examination tool for large pedigrees, with inbreeding and genetic merit data also. Free WIN program. |