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Molecular Biology Methods (156)
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  http://rebase.neb.com/rebase/rebase.html http://rebase.neb.com/rebase/rebase.html
The restriction enzyme database, from New England Biolabs.
  Web Primer http://seq.yeastgenome.org/cgi-bin/SGD/web-primer
Design of PCR or sequencing primers.
  RestrictionMapper http://www.restrictionmapper.org
RestrictionMapper is an on line restriction mapping tool. It reports exact cut points and supports circular DNA. It also includes a virtual digest function and a dilution calculator.
  Graphical Codon Usage Analyzer http://gcua.schoedl.de
Displays the codon quality in two different ways, codon usage frequency or relative adaptiveness values. FAQ included.
  http://watcut.uwaterloo.ca/watcut/watcut/template.php http://watcut.uwaterloo.ca/watcut/watcut/template.php
Watcut is an on-line tool that offers three functions: 1. restriction mapping, 2. silent mutation scanning, and 3. scanning for amplification-created restriction sites that facilitate detection of SNP by PCR.
  Bioexplorer Toolbar http://www.bioexplorer.net/toolbar/
A bioinformatics toolbar designed for IE and Mozilla browsers. It provides direct access to NCBI databases (PubMed, Protein, Nucleotide, and Taxonomy) and to other biological Web resources, including search engines.
  Webcutter 2.0 http://users.unimi.it/~camelot/tools/cut2.html
Free, online software for restriction mapping nucleotide sequences.
  NEBcutter http://tools.neb.com/NEBcutter/index.php3
On-line DNA sequence tool to find large, non-overlapping, open reading frames and sites for all restriction enzymes-from New England BioLabs.
  LIC Generator http://noxtoolbox.ibs.fr/LICgenerator/
Online resource to generate primers for Ligation Independent Cloning of PCR products.

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